OmicsLogic Metagenomics

Metagenomics is a relatively new field of research based on high-throughput sequencing (or Next Generation Sequencing) and it’s popularity signifies a growing appreciation for the composition of microbial communities (microbiomes) and the genetic information their genomes carry. Metagenomics allows us to study the microbiome in its natural environment and learn about the cooperative and often symbiotic relationships between prokaryotes, eukaryotes, viruses and archaea.

Upcoming Events

  1. 29 Oct
  2. 1 Nov
  3. 5 Nov
  4. 8 Nov
  5. 12 Nov
  6. 15 Nov
  7. 15 Nov
  8. 10 Dec
  9. 13 Dec
  10. 17 Dec
  11. 20 Dec
  12. 23 Dec
  1. 29
    October
    OmicsLogic Metagenomics Program overviewRegister Now
    OmicsLogic Metagenomics Program overview
    09:30 - 10:30
    Online

    Session Topics: Overview of the entire course, Overview of the tools and resources for this program (edu.t-bio.info courses, projects and datasets, and the T-BioInfo...

  2. 01
    November
    16s metagenomics sequencingRegister Now
    16s metagenomics sequencing
    09:30 - 10:30
    Online

    Session Topics: History & Significance of 16s rRNA in Metagenomics,16S Metagenomic Sequencing Library Preparation: (Protocol Overview): Sample collection and preparation, DNA extraction, 16S rRNA...

  3. 05
    November
    Session 3 – Microbiome – functional bacterial communityRegister Now
    Microbiome – functional bacterial community
    09:30 - 10:30
    Online

    Session Topics: Understanding the Microbiome, Diversity, The Microbiome and Human Health, The gut microbiota, Gut health and the brain, Metabolome characterization. This is an...

  4. 08
    November
    Session 4 – Overview of 16S metagenomics analysisRegister Now
    Analysis challenges – short reads, HVRs, OTUs
    09:30 - 10:30
    Online

    Session Topics:Overview of 16S metagenomics analysis, Pre-processing, data simulation, and error correction, Mapping to a reference database (Short overview), Generating the Abundance Table, Post-processing...

  5. 12
    November
    Session 5 – Mapping on databasesRegister Now
    Mapping on databases
    09:30 - 10:30
    Online

    Session Topics: Mapping to a reference database (Detailed), Silva, Greengenes, NCBI – hypervariable regions of ribosomal RNA and full genome databases This is an...

  6. 15
    November
    Session 6 – DADA2 pipelineRegister Now
    DADA2 pipeline
    09:30 - 10:30
    Online

    Overview of DADA2, OTUs, Amplicon 16S/18S analysis algorithms, Pipeline demonstration, Data analysis and results.  This is an event from the OmicsLogic Metagenomics program, you...

  7. 15
    November
    Session 7 – Metagenomics project & multiomics approach in BioinformaticsRegister Now
    Metagenomics project & multiomics approach in Bioinformatics
    09:30 - 10:30
    Online

    Project details: Project from the edu site  This is an event from the OmicsLogic Metagenomics program, you can register for the full program here: https://edu.t-bio.info/organizations/omicslogic-metagenomics/...

  8. 10
    December
    Session 8 – Bacterial populations- GWASRegister Now
    Bacterial populations- GWAS
    09:30 - 10:30
    Online

    Session Topics: How Genome Wide Association studies can be used to analyze microbial response to soil composition and identify other genotype-phenotype associations This is...

  9. 13
    December
    Session 9 – Viral genome detection in standard RNA-SeqRegister Now
    Viral genome detection in standard RNA-Seq
    09:30 - 10:30
    Online

    Session Topics: detection of viral genomes presence and estimation of contamination. Example: SF-9 project This is an event from the OmicsLogic Metagenomics program, you...

  10. 17
    December
    Session 10 – Phylogenetic analysisRegister Now
    Phylogenetic analysis
    09:30 - 10:30
    Online

    Session Topics: Analysis of phylogenetic relationships between genomes to study evolutionary divergence based on select regions or genes. This is an event from the...

  11. 20
    December
    Session 11 – Drug resistanceRegister Now
    Drug resistance
    09:30 - 10:30
    Online

    Session Topics: Association of tuberculosis genomic variations with drug resistance mechanisms for antibiotic treatment This is an event from the OmicsLogic Metagenomics program, you...

  12. 23
    December
    Session 12 – Evolution, fitness and quasi speciesRegister Now
    Evolution, fitness and quasi species
    09:30 - 10:30
    Online

    Session Topics: Analysis of viral fitness in passages of viral populations to identify mutations responsible for adaptation. This is an event from the OmicsLogic...

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Introduction to Metagenomics

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