SARS-COV-2 Genomic Data Analysis

In this program, we will learn about the novel coronavirus genomics and understand how genomic data analysis tools can help identify specific viral strains, understand multiple sequence alignment, phylogenetic analysis, and the significance of mutations in the context of viral protein structure and function. We will further discuss the viral genomes of Covid-19, genes, proteins, and the virology of the disease. We discussed how the data and the various analysis tools can help in the detection of viral genomes, compare and distinguish between viral strains, identify the impact of mutations on the functionality of viral proteins, and discuss the virology from the standpoint of data.

Upcoming Events

  1. 08
    June
    Sequencing Viral Genomes
    10:00 - 11:00
    Online

    Using Next Generation Sequencing to Study Viral Genomes

  2. 12
    June
    Detecting VIRAL Genomes in Animals and Patients using NGS
    10:00 - 11:00
    Online

    Bioinformatics techniques for finding viral genomes in host samples

  3. 15
    June
    Using Genomic Reference Databases of Viral Sequences
    10:00 - 11:00
    Online

    Detection of Viral Genomes in Host Samples (Part 2)

  4. 19
    June
    Multiple Sequence Alignment Similarity and Consensus
    10:00 - 11:00
    Online

    Comparing Sequences and Finding a Consensus

  5. 22
    June
    NCBI Virus: High-quality COVID-19 Genomic Data
    10:00 - 11:00
    Online

    Finding and preparing files for analysis on NCBI Virus

  6. 26
    June
    Phylogenetic Analysis
    10:00 - 11:00
    Online

    Identifying relationships between viral sequences

  7. 29
    June
    Hands-on Session: Preparing and Running your pipeline
    10:00 - 11:00
    Online

    Multiple sequence alignment of viral genomes, Preparing a full pipeline of MSA and Phylogeny

  8. 03
    July
    Q&A on Pipeline Outputs
    10:00 - 11:00
    Online

    Using Bioinformatics Pipelines for Big Data, Preparing a Workflow based on data type, Selecting the right references and databases, Interpreting evolutionary relationships, Visualizing and...

  9. 06
    July
    Program Review
    10:00 - 11:00
    Online

    Evaluating the program timeline, Support and topics, Discussion about resources needed to improve course delivery.

  10. 10
    July
    Applying bioinformatics to the vaccine and drug design
    10:00 - 11:00
    Online

    Bioinformatics in translational research: vaccine and drug design

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